How to use CFTRare?

CFTR-France
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Databases et tools:
CFTR-France database

CFTR-France

  • phenotypes
  • clinical data and updates
  • sequence variations
  • variants classification
  • functional studies

      Please select any CFTR variant with the DNA, protein, genomic nomenclature or legacy name, using:

  • exact HGVS c. or p. (variations), e.g. 'c.1523T>G' or 'p.(Phe508Cys)'.
  • exact HGVS genomic nomenclature (hg19), e.g. 'g.117199648T>G'.
  • legacy name, e.g. '394delTT'.
  • partial match on HGVS c., p. or g. names, e.g. '117199' would return all variants with '117199' in c., p. or g. name.

CFTR-NGS variants catalogue

CFTR-NGS

  • phenotypes
  • allele frequency
  • NGS criteria

      Please select any CFTR variant with the DNA, protein, genomic nomenclature or legacy name, using:

  • exact HGVS c. or p. (variations), e.g. 'c.1523T>G' or 'p.(Phe508Cys)'.
  • exact HGVS genomic nomenclature (hg19), e.g. 'g.117199648T>G'.
  • legacy name, e.g. '394delTT'.
  • partial match on HGVS c., p. or g. names, e.g. '117199' would return all variants with '117199' in c., p. or g. name.

CYSMA

CYSMA

  • amino acid conservation
  • 3D models
  • predictions of structural impacts

      Please select any CFTR missense variant with the protein nomenclature, in 1- or 3-letter amino acid code, e.g.       'N1303K' or 'Asn1303Lys' to test a characterized disease-causing variant or 'V470M' to see a CFTR polymorphism.

MobiDetails
MobiDetails
  • in silico predictions
  • public databases
  • literature

      Please select any CFTR variant with the DNA, protein nomenclature or legacy name, using :

  • exact HGVS c. or p. (allowing variations), e.g. 'c.1523T>G' or 'p.(Phe508Cys)'.
  • partial match on HGVS c. or p. names, e.g. '1523' would return all variants with 1523 in c. or p. name.



If you don't have any favorite tool yet

Please select a variant in the CFTRare search engine located at the bottom of the page to combine all the above tools




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VLMCHUUM PhyMedExp