Variant NM_000492.4:c.3937C>A


Variant details:
Name NM_000492.4:c.3937C>A
Protein name NP_000483.3:p.(Gln1313Lys)
Genomic name (hg19) chr7:g.117292959C>A    UCSC    gnomAD
#Exon/intron exon 24
Legacy Name Q1313K
Class VUS
Subclass VUS2
WT sequence GGATCCCTATGAACAGTGGAGTGAT C AAGAAATATGGAAAGTTGCAGATGA
Mutant sequence GGATCCCTATGAACAGTGGAGTGAT A AAGAAATATGGAAAGTTGCAGATGA


External sources:

Not found		dbSNP
rs121909026






Pathogenicity predictions:
AGVGD MAPP SIFT PPH2
C0 0.01776 0.29 0.01
VUS1 VUS4 VUS1 VUS1

Color code:   non disease-causing <   VUS1 <   VUS2 <   VUS3 <   VUS4 <   VUS5 <   disease-causing




No patient found in CFTR-NGS catalogue


2 patients carrying this variant are reported in CFTR-France:

TOTAL NUMBER OF PATIENTS 2
CF 2



Detailed genotypes:
Phenotype Patient ID Variant status Additional variants
CF 4914heterozygoteCF-causing - Cis
varying clinical consequence - Trans
CF 2656heterozygoteCF-causing- Undef


Color code:   non disease-causing <   VUS1 <   VUS2 <   VUS3 <   VUS4 <   VUS5 <   disease-causing



            CFTR variants are clustered into five groups:
  • CF-causing: when in trans with another CF-causing mutation, will result in CF.
  • CFTR-RD causing: when in trans with a CF-causing mutation, will result in CFTR-related disorders (CFTR-RD) such as chronic pancreatitis, bronchiectasis, CRS-NP (chronic rhinosinusitis with or without nasal polyposis) or CBAVD (congenital absence of vas deferens), according to Bombieri C et al., 2011.
  • Varying clinical consequence: when in trans with another CF-causing mutation, can either result in CF or in a CFTR-RD.
  • Non disease-causing: when in trans with a CF-causing mutation, will not cause CF, nor CFTR-RD.
  • VUS (Variant of unknown clinical significance): unclassified because of insufficient data.