CFTR-NGS variants catalogue
Variant hg19:chr7:117221885G/A
Name | NM_000492.4:c.1585-5908G>A |
Protein name | NP_000483.3:p.(?) |
Genomic name (hg19) | chr7:g.117221885G>A UCSC gnomAD |
#Exon/intron | intron 11 |
Type in CFTR-NGS catalogue | - |
Class in CFTR-France | not reported |
WT sequence | AATGGAGTGATCACGGTTCATTGCA G CCTTGACCTCCTGGGCTCAAGCGAT |
Mutant sequence | AATGGAGTGATCACGGTTCATTGCA A CCTTGACCTCCTGGGCTCAAGCGAT |
MAF (GnomAD) | 4.54e-03 |
Splicing prediction (SpliceAI) | AG: 0.00 (48) AL: 0.01 (-35) DG: 0.00 (-35) DL: 0.00 (1) |
Not found | Not found | dbSNP no rs | Not found |
Sanger (present/not present/not verified) |
Minigene (effect/no effect/not performed) |
not verified | not performed |
No patient found in CFTR-France |
TOTAL NUMBER OF INDIVIDUALS | 1 |
---|---|
CFTR-RD | 1
|
ID | Phenotype | Laboratory | Experiment | Variant status | Variant filter | Quality score | Depth of coverage |
---|---|---|---|---|---|---|---|
8442 | CFTR-RD | Montpellier | 40216_varilh | heterozygous | PASS | 900 | 71 |