catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117220534A/C


CFTR-NGS Variant details:
Name NM_000492.4:c.1585-7259A>C
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117220534A>C    UCSC    gnomAD
#Exon/intron intron 11
Type in CFTR-NGS catalogue -
Class in CFTR-France not reported
WT sequence AAAGGAACCTGACAATATCTTTTAA A AATAAAGAAAACGCATACTTTTGAC
Mutant sequence AAAGGAACCTGACAATATCTTTTAA C AATAAAGAAAACGCATACTTTTGAC


Additional information:
MAF (GnomAD) -
Splicing prediction (SpliceAI) AG: 0.00 (-21)
AL: 0.00 (1)
DG: 0.00 (46)
DL: 0.00 (1)




External sources:

Not found

Not found
dbSNP
no rs

Not found

Variant validation:
Sanger
(present/not present/not verified)
Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
CF 1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
9883CFMontpellier160218_varilhheterozygous PASS 7915 729





Go to CFTRare
VLMCHUUM