catalog




CFTR-NGS variants catalogue


Variant hg19:chr7:117151216A/C


CFTR-NGS Variant details:
Name NM_000492.4:c.273+2020A>C
Protein name NP_000483.3:p.(?)
Genomic name (hg19) chr7:g.117151216A>C    UCSC    gnomAD
#Exon/intron intron 3
Type in CFTR-NGS catalogue -
Class in CFTR-France not reported
WT sequence TCTTCTCAGGAGACACAGGCTACAG A GCTTGAAGGCTGAGGATTCTTCCAG
Mutant sequence TCTTCTCAGGAGACACAGGCTACAG C GCTTGAAGGCTGAGGATTCTTCCAG


Additional information:
MAF (GnomAD) 3.91e-02
Splicing prediction (SpliceAI) AG: 0.00 (-16)
AL: 0.00 (2)
DG: 0.00 (26)
DL: 0.00 (0)




External sources:

Not found

Not found
dbSNP
rs35604119

Not found

Variant validation:
Sanger
(present/not present/not verified)
Minigene
(effect/no effect/not performed)
not verifiednot performed



No patient found in CFTR-France


1 individual (out of 136) carrying this variant is reported in CFTR-NGS catalogue:

TOTAL NUMBER OF INDIVIDUALS 1
CFTR-RD1
  • CFTR-RD  1



Details of NGS patients:
ID Phenotype Laboratory Experiment Variant status Variant filter Quality score Depth of coverage
9CFTR-RDMontpellier150517_varilhheterozygous PASS 5184 488





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